Epigenetics

RAMEN - Regional Association of Methylome variability with the Exposome and geNome
R package whose goal is to identify Variable Methylated Regions (VMRs) in microarray DNA methylation data. Additionally, using Genotype (G) and Environmental (E) data, it can identify which G, E, G+E or GxE model better explains this variability.s
Sep 21, 2023
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RAMEN - Regional Association of Methylome variability with the Exposome and geNome
Comparative transcriptome analysis reveals key epigenetic targets in SARS-CoV-2 infection
Identification of potential epigenetic key players during COVID-19 infection using integrative analyses of gene co-expression networks and de-novo pathway enrichment.
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Comparative transcriptome analysis reveals key epigenetic targets in SARS-CoV-2 infection
Identificación de genes codificantes y elementos repetidos regulados por DAXX mediante RNA-SEQ
Undergraduate thesis. Trancriptomic analysis to study the effect of DAXX, a H3.3 histone variant chaperone, in human cell lines from lung, colon and glioblastoma. DAXX was found to be associated with mainly tissue-specific genes. Shared disregulated genes were found to be associated with cancer.
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Identificación de genes codificantes y elementos repetidos regulados por DAXX mediante RNA-SEQ